Browse of TCMCG006C62156 protein

CDS

Accession Number	TCMCG006C62156
gbkey	CDS
Protein Id	XP_013716532.1
Location	complement(join(44678965..44679363,44679506..44679664,44681348..44681450,44681792..44681872,44681951..44682027,44682119..44682190,44682291..44682367,44682486..44682546,44682631..44682728,44682822..44683219,44683331..44683396,44683504..44683583,44683702..44683877,44684040..44684071,44684174..44684334,44684433..44684597,44684692..44684756,44684883..44685011,44685099..44685205,44685495..44685618,44685727..44685805,44685909..44685974))
Gene	BNAA09G49170D
GeneID	106420223
Organism	Brassica napus

Protein

Length	924aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013861078.1
Definition	tRNA ligase 1 isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	atrnl,rnl
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000278        [VIEW IN EMBL-EBI] GO:0000281        [VIEW IN EMBL-EBI] GO:0000394        [VIEW IN EMBL-EBI] GO:0000910        [VIEW IN EMBL-EBI] GO:0003006        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003972        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006388        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006399        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008033        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008356        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0008452        [VIEW IN EMBL-EBI] GO:0009790        [VIEW IN EMBL-EBI] GO:0009791        [VIEW IN EMBL-EBI] GO:0009793        [VIEW IN EMBL-EBI] GO:0009966        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010069        [VIEW IN EMBL-EBI] GO:0010070        [VIEW IN EMBL-EBI] GO:0010154        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0010646        [VIEW IN EMBL-EBI] GO:0010928        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016874        [VIEW IN EMBL-EBI] GO:0016886        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0023051        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042245        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048316        [VIEW IN EMBL-EBI] GO:0048583        [VIEW IN EMBL-EBI] GO:0048608        [VIEW IN EMBL-EBI] GO:0048731        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051301        [VIEW IN EMBL-EBI] GO:0061458        [VIEW IN EMBL-EBI] GO:0061640        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTAGGGAGGCTTGGGGAACTAAGGCTTTAAATAAGGAGGCAGAATTTAATGATTTTCTTGAGAAAAATCGCATGTGTATATCTATGGAACTGGTTACAGCTGTTCTTGGAGATCATGGTCAACGCCCACTGGATGATTATGTGGTGGTGACGGCTGTTACCGAGTTAGGTAATGGCAAGCCAAAGTTTTACTCAACTTCCGAAATAATTGCATTTTGCCGGAAATGGCGTCTACCAACAAACCATGTTTGGCTGTTTTCCACAAGGAAATCAGTGACCTCCTTTTTTGCCGCATTTGATGCACTCTGTGAAGAAGGGACAGCAACTTCAGTCTGTAGAGCTCTTGATGAAGTTGCTGATATATCAGTCCCAGCCTCCAAGGACCATGTGAAGGTGCAGGGTGAGATATTAGAGGGTCTTGTGGCGCGTATCGTAAGCAGTGGGAGCGCCAGAGATATGGAAAATGTATTGAGAGATCATCCTCCACCACCCTTTGATGGAGCTGATCTTAATTTGGGACTCAGTTTAAGAGAGATATGTGCTGCCCATAGATCTAACGAGGAACAGCAAATAAAAGCACTTTTAAAGAGTGTTGGCCCAAGCTTTTGCCCCAGTGACTTGGACTGGTTTGGAGATGAATCTGCAGATTCTCATTCGAAAAATGCTGACAAATCTGTTGTAACAAAATTCCTCCAAGCTCAGCCTGCAGATTATTCAACTAGTAAATTACAGGAAATGATACGCTTGATGAAGGAAAAACGTCTTCCAGCCGCATTCAAGTGTTACCATAATTTTAATAGAGCTAACGATGTGTCACCTGAGAACCTATTTTATAAATTGGTTGTCCATGTGCACAGTGATTCAGGATTTAGGCGTTACCAGAGAGAGATGAGGCACATGCCTGGCTTGTGGCCTTTATATCGAGGTTTCTTTGTTGATATTAATTTGTTCAAGTCAAACAAAGGAAGGGATCAGATGGCTCTGAAAAGCATTGATAGTGCGGTCAAAGATGCCAGTGAAAACAGTGGTCAGCAAGGAAAAGATGGTTTGGCTGATGATGATGCTAACTTAATGATCAAATTAAAGTTTCTTACATATAAGCTGAGAACCTTTCTGATCCGCAATGGCCTATCAATTCTATTTAAAGAGGGGCCGGCAGCTTATAAAGCCTATTACCTTAGGCAAATGAAGATATGGGGTACTTCTGATGGAAAGCAGAAGGAACTTTGCAAGATGCTTGATGAATGGGCTGCTCACATAAAAAGAAAGTGTGGGAATAAGCAGCTATCTTCATCAATATATCTAAGCGAAGCTGAGCCATTCCTGGAGCAGTACGCTAAACGGAGCCCCAAAAATCAAGTTTTGGTAGGGTCTGCTGGGAATCTAGTGAGAGCTGAGGACTTCTTGGCACTTGTTGACGGTGATCTAGATGAAGAAGGTGATCTTATGAAGAAAGATGAAGTGACACCAGCTACTCCTGAGCCAGCTGTGAAGGAAGCTGTCCAAAAGGCCGAGGGGTTAATTGTATTCTTTCCAGGTATTCCTGGATGTGCTAAGTCCGCACTTTGTAAGGAGTTATTGAACGCACCAGGAGGTCTTGGAGATGATCGTTCAGTGCATACTCTGATGGGTGATCTTGTCAAAGGAAAATATTGGCCAAAGGTTGCTGATGAACGTCGTAAAAAGCCTCAATCAATTATGTTGGCTGACAAAAATGCCCCAAATGAAGATGTCTGGAGACAGATTGAAGACATGTGTAGGAGAACTAGGACTTCTGCAGTTCCAGTCGTTCCTGATTCTGAAGGAACCGAGTCAAATCCATATTCACTTGATGCCTTGGCTGTTTTCATGTTCCGTGTAATTCAAAGAGTTAACCATCCGGGGAATCTCGACAAGGCATCTTCGAATGCAGGCTATGTGCTATTGATGTTTTACCACCTTTATGAAGGAAAGAATCGCAAAGAATTTGAGAGTGAATTGATTGATAGATTTGGCTCGCTTGTCAAGATGCCACTGTTGAGATCAGAAAGGAGTCCTTTACCTGATCCTGTTAAATCGATTATTGAGGAGGGCATAGACTTGTTCCAGCTCCACAGTAGAAGGCATGGGAGACTTGAGTCCTCAAAAGGAACCTATGCAGCGGAGTGGGCTAAATGGGAAAAACAGCTGCGCAATACTTTAGCTGCAAATTCACAGTATCTCAATTCTATTCAGGTTCCGTTTGAGTCTGCGGTTCAGCATGTGCGTGAAGAGCTAAAAAGAATAGCAAAGGGTGAATACAAACCACCAAGCTCAGAGAAAACAAAACATGGCTCTATTGTCTTCGCTGCCATCAACTTACCTGTTACTCAAGTCCATAGTCTTCTTGAAAAGTTGGCCGAATCAAACCCAACAATGAGATCTTTTCTAGAAGGGAAGAAGCACCGCATAGAGGAAAAACTCGAACGTGCTCACGTGACGCTTGCTCACAAGAGAAGCCACGGAGTAGCAGCCGTAGCAAGATACGGTCAACACCTAAACAGAGAAGTACCCGTAGAGCTCACCGAGCTCATCTTCAACGACAAGATGGCTGCTTTTACAGCCCACGTCGGATCTGTAGACGGAGAGACCATAGTCTCCAAGAACGAATGGCCGCATGTCACGTTGTGGACTGCAGAAGGCGTTACTGCGAAAGAGGCCAACGCTTTGCCTCAGCTTTACGCAGACGGCAAGGCTAGTCGCGTAGTGATAGATCCTCCTGCCTCAGTCGCAGGTCCTCTGGAGTTTTTCTGA

Protein:   MFREAWGTKALNKEAEFNDFLEKNRMCISMELVTAVLGDHGQRPLDDYVVVTAVTELGNGKPKFYSTSEIIAFCRKWRLPTNHVWLFSTRKSVTSFFAAFDALCEEGTATSVCRALDEVADISVPASKDHVKVQGEILEGLVARIVSSGSARDMENVLRDHPPPPFDGADLNLGLSLREICAAHRSNEEQQIKALLKSVGPSFCPSDLDWFGDESADSHSKNADKSVVTKFLQAQPADYSTSKLQEMIRLMKEKRLPAAFKCYHNFNRANDVSPENLFYKLVVHVHSDSGFRRYQREMRHMPGLWPLYRGFFVDINLFKSNKGRDQMALKSIDSAVKDASENSGQQGKDGLADDDANLMIKLKFLTYKLRTFLIRNGLSILFKEGPAAYKAYYLRQMKIWGTSDGKQKELCKMLDEWAAHIKRKCGNKQLSSSIYLSEAEPFLEQYAKRSPKNQVLVGSAGNLVRAEDFLALVDGDLDEEGDLMKKDEVTPATPEPAVKEAVQKAEGLIVFFPGIPGCAKSALCKELLNAPGGLGDDRSVHTLMGDLVKGKYWPKVADERRKKPQSIMLADKNAPNEDVWRQIEDMCRRTRTSAVPVVPDSEGTESNPYSLDALAVFMFRVIQRVNHPGNLDKASSNAGYVLLMFYHLYEGKNRKEFESELIDRFGSLVKMPLLRSERSPLPDPVKSIIEEGIDLFQLHSRRHGRLESSKGTYAAEWAKWEKQLRNTLAANSQYLNSIQVPFESAVQHVREELKRIAKGEYKPPSSEKTKHGSIVFAAINLPVTQVHSLLEKLAESNPTMRSFLEGKKHRIEEKLERAHVTLAHKRSHGVAAVARYGQHLNREVPVELTELIFNDKMAAFTAHVGSVDGETIVSKNEWPHVTLWTAEGVTAKEANALPQLYADGKASRVVIDPPASVAGPLEFF